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Poly-α-Glutamic Acid Synthesis Using a Novel Catalytic Activity of RimK from Escherichia coli K-12 ▿ †

机译:利用来自大肠杆菌K-12的RimK的新型催化活性合成聚α-谷氨酸

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摘要

Poly-l-α-amino acids have various applications because of their biodegradable properties and biocompatibility. Microorganisms contain several enzymes that catalyze the polymerization of l-amino acids in an ATP-dependent manner, but the products from these reactions contain amide linkages at the side residues of amino acids: e.g., poly-γ-glutamic acid, poly-ɛ-lysine, and cyanophycin. In this study, we found a novel catalytic activity of RimK, a ribosomal protein S6-modifying enzyme derived from Escherichia coli K-12. This enzyme catalyzed poly-α-glutamic acid synthesis from unprotected l-glutamic acid (Glu) by hydrolyzing ATP to ADP and phosphate. RimK synthesized poly-α-glutamic acid of various lengths; matrix-assisted laser desorption ionization-time of flight-mass spectrometry showed that a 46-mer of Glu (maximum length) was synthesized at pH 9. Interestingly, the lengths of polymers changed with changing pH. RimK also exhibited 86% activity after incubation at 55°C for 15 min, thus showing thermal stability. Furthermore, peptide elongation seemed to be catalyzed at the C terminus in a stepwise manner. Although RimK showed strict substrate specificity toward Glu, it also used, to a small extent, other amino acids as C-terminal substrates and synthesized heteropeptides. In addition, RimK-catalyzed modification of ribosomal protein S6 was confirmed. The number of Glu residues added to the protein varied with pH and was largest at pH 9.5.
机译:聚-1-α-氨基酸由于其可生物降解的特性和生物相容性而具有各种应用。微生物包含几种以ATP依赖方式催化l-氨基酸聚合的酶,但是这些反应的产物在氨基酸的侧残基上含有酰胺键:例如,聚-γ-谷氨酸,聚---赖氨酸和蓝霉素。在这项研究中,我们发现了RimK的新型催化活性,RimK是一种衍生自大肠杆菌K-12的核糖体蛋白S6修饰酶。该酶通过将ATP水解为ADP和磷酸盐来催化未保护的l-谷氨酸(Glu)合成聚α-谷氨酸。 RimK合成各种长度的聚-α-谷氨酸;基质辅助激光解吸电离飞行时间质谱表明,在pH 9时合成了46聚体的Glu(最大长度)。有趣的是,聚合物的长度随pH的变化而变化。在55°C孵育15分钟后,RimK也显示86%的活性,因此显示出热稳定性。此外,肽的延伸似乎在C末端以逐步的方式被催化。尽管RimK对Glu表现出严格的底物特异性,但它在较小程度上还使用了其他氨基酸作为C末端底物和合成的异肽。另外,证实了RimK催化的核糖体蛋白S6的修饰。添加到蛋白质中的Glu残基的数量随pH的变化而变化,在pH 9.5时最大。

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